Chin J Plant Ecol ›› 2007, Vol. 31 ›› Issue (4): 561-567.DOI: 10.17521/cjpe.2007.0072
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LU Jian-Ying1, MA Rui-Jun2,*(), SUN Kun1
Received:
2006-07-06
Accepted:
2006-12-11
Online:
2007-07-06
Published:
2007-07-30
Contact:
MA Rui-Jun
LU Jian-Ying, MA Rui-Jun, SUN Kun. CLONAL DIVERSITY AND STRUCTURE IN POLYGONUM VIVIPARUM[J]. Chin J Plant Ecol, 2007, 31(4): 561-567.
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URL: https://www.plant-ecology.com/EN/10.17521/cjpe.2007.0072
Fig.1 The distribution map of study population of Polygonum viviparum Showing sampling places of seven populations of Polygonum viviparum P1: 冶力关-临潭 Yeliguan-Lintan P2: 尕玛梁 Gamaliang P3: 玛曲 Maqu P4: 尕海-碌曲 Gahai-Luqu P5: 碌曲-合作 Luqu-Hezuo P6: 依毛梁 Yimaoliang P7: 和政南阳山 Hezheng Nanyangshan Mountain
种群 Population | 海拔 Altitude (m) | 采样个数 No. of sample | 生境 Habitats |
---|---|---|---|
P1 | 2 500 | 25 | 山上 On the Mountain |
P2 | 3 900 | 25 | 路边草地 Roodside meadow |
P3 | 3 400 | 25 | 草地 Meadow |
P4 | 3 150 | 20 | 草地 Meadow |
P5 | 3 000 | 27 | 湿地 March |
P6 | 2 900 | 24 | 湿地 March |
P7 | 2 000 | 25 | 河滩 Beach |
Table 1 The habitats in sampling sites of Polygonum viviparum
种群 Population | 海拔 Altitude (m) | 采样个数 No. of sample | 生境 Habitats |
---|---|---|---|
P1 | 2 500 | 25 | 山上 On the Mountain |
P2 | 3 900 | 25 | 路边草地 Roodside meadow |
P3 | 3 400 | 25 | 草地 Meadow |
P4 | 3 150 | 20 | 草地 Meadow |
P5 | 3 000 | 27 | 湿地 March |
P6 | 2 900 | 24 | 湿地 March |
P7 | 2 000 | 25 | 河滩 Beach |
引物 Primer | 序列(5'-3') Sequence (5'-3') | DNA总位点数 Total number of loci | 多态位点数 No. of polymorphic loci |
---|---|---|---|
S5 | TGCGCCCTTC | 10 | 7 |
S8 | GTCCACACGG | 13 | 7 |
S12 | CCTTGACGCA | 7 | 6 |
S13 | TTCCCCCGCT | 8 | 6 |
S223 | CTCCCTGCAA | 7 | 4 |
S393 | ACCGCCTGCT | 8 | 5 |
S494 | GGACGCTTCA | 10 | 6 |
S500 | TCGCCCAGTC | 11 | 7 |
S1102 | ACTTGACGGG | 10 | 8 |
S1107 | AACCGCGGCA | 7 | 6 |
S1156 | CACAACGGGA | 10 | 9 |
S1420 | CTTCTCGGAC | 8 | 7 |
S2113 | CCGCCGGTAA | 8 | 6 |
Table 2 The sequence of primers and the number of tested loci
引物 Primer | 序列(5'-3') Sequence (5'-3') | DNA总位点数 Total number of loci | 多态位点数 No. of polymorphic loci |
---|---|---|---|
S5 | TGCGCCCTTC | 10 | 7 |
S8 | GTCCACACGG | 13 | 7 |
S12 | CCTTGACGCA | 7 | 6 |
S13 | TTCCCCCGCT | 8 | 6 |
S223 | CTCCCTGCAA | 7 | 4 |
S393 | ACCGCCTGCT | 8 | 5 |
S494 | GGACGCTTCA | 10 | 6 |
S500 | TCGCCCAGTC | 11 | 7 |
S1102 | ACTTGACGGG | 10 | 8 |
S1107 | AACCGCGGCA | 7 | 6 |
S1156 | CACAACGGGA | 10 | 9 |
S1420 | CTTCTCGGAC | 8 | 7 |
S2113 | CCGCCGGTAA | 8 | 6 |
种群 Population | 样本大小(N) Sample size | 种群基株(G) Number of genets | 平均克隆大(N/G) Average size of genotype | 基因型比率(PD) Proportion of distinct genotypes | Simpson多样性指数(D) Simpson diversity index | 均匀度(E) Fager's evenness |
---|---|---|---|---|---|---|
P1 | 20 | 10 | 2.000 | 0.500 | 0.879 | 0.712 |
P2 | 20 | 8 | 2.500 | 0.400 | 0.816 | 0.684 |
P3 | 20 | 4 | 5.000 | 0.200 | 0.500 | 0.427 |
P4 | 20 | 5 | 4.000 | 0.250 | 0.800 | 0.911 |
P5 | 20 | 7 | 2.857 | 0.350 | 0.689 | 0.441 |
P6 | 20 | 4 | 5.000 | 0.200 | 0.284 | 0.000 |
P7 | 20 | 5 | 4.000 | 0.250 | 0.505 | 0.288 |
平均Mean | 20 | 6 | 3.622 | 0.307 | 0.639 | 0.495 |
Table 3 Clonal diversity in all populations
种群 Population | 样本大小(N) Sample size | 种群基株(G) Number of genets | 平均克隆大(N/G) Average size of genotype | 基因型比率(PD) Proportion of distinct genotypes | Simpson多样性指数(D) Simpson diversity index | 均匀度(E) Fager's evenness |
---|---|---|---|---|---|---|
P1 | 20 | 10 | 2.000 | 0.500 | 0.879 | 0.712 |
P2 | 20 | 8 | 2.500 | 0.400 | 0.816 | 0.684 |
P3 | 20 | 4 | 5.000 | 0.200 | 0.500 | 0.427 |
P4 | 20 | 5 | 4.000 | 0.250 | 0.800 | 0.911 |
P5 | 20 | 7 | 2.857 | 0.350 | 0.689 | 0.441 |
P6 | 20 | 4 | 5.000 | 0.200 | 0.284 | 0.000 |
P7 | 20 | 5 | 4.000 | 0.250 | 0.505 | 0.288 |
平均Mean | 20 | 6 | 3.622 | 0.307 | 0.639 | 0.495 |
种群 Population | 克隆数 Number of clones | 构型 Clonal architecture | 种群内克隆分布情况(不同克隆的植株用‘/’隔开) Clones distribution within population (different clones distingwished by `/') |
---|---|---|---|
P1 | 10 | 过渡型 Transition | 1,2/3,4,5,6,8,10/7/9/11,13/12/14/15-17,19/18/20 |
P2 | 8 | 过渡型 Transition | 1,3,5,7,8,9,12,18/2,4,6/10/11/13/14/15-17/19,20 |
P3 | 4 | 密集型 Phalanx | 1-11,15,16,17/12,14/13/18-20 |
P4 | 5 | 游击型 Guerilla | 1,3,6,11,12,13,16/2,4,5,14,17/7,15/8-10/18-20 |
P5 | 7 | 游击型 Guerilla | 1,2/3,4,6,7,9,10,12,15,16,18,20/5/8/11,14,19/13/17 |
P6 | 4 | 密集型 Phalanx | 1-4,6-15,17,19,20/5/16/18 |
P7 | 5 | 密集型 Phalanx | 1/2-4,6-15,17/5/16/18-20 |
Table 4 Clones number and clonal architecture within populations
种群 Population | 克隆数 Number of clones | 构型 Clonal architecture | 种群内克隆分布情况(不同克隆的植株用‘/’隔开) Clones distribution within population (different clones distingwished by `/') |
---|---|---|---|
P1 | 10 | 过渡型 Transition | 1,2/3,4,5,6,8,10/7/9/11,13/12/14/15-17,19/18/20 |
P2 | 8 | 过渡型 Transition | 1,3,5,7,8,9,12,18/2,4,6/10/11/13/14/15-17/19,20 |
P3 | 4 | 密集型 Phalanx | 1-11,15,16,17/12,14/13/18-20 |
P4 | 5 | 游击型 Guerilla | 1,3,6,11,12,13,16/2,4,5,14,17/7,15/8-10/18-20 |
P5 | 7 | 游击型 Guerilla | 1,2/3,4,6,7,9,10,12,15,16,18,20/5/8/11,14,19/13/17 |
P6 | 4 | 密集型 Phalanx | 1-4,6-15,17,19,20/5/16/18 |
P7 | 5 | 密集型 Phalanx | 1/2-4,6-15,17/5/16/18-20 |
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