Chin J Plant Ecol ›› 2009, Vol. 33 ›› Issue (5): 966-973.DOI: 10.3773/j.issn.1005-264x.2009.05.016
Special Issue: 生物多样性
• Research Articles • Previous Articles Next Articles
LIU Wei*(), WANG Xi, GAN You-Min, HUANG Lin-Kai, XIE Wen-Gang, MIAO Jia-Min
Received:
2008-11-27
Online:
2009-11-27
Published:
2009-09-30
Contact:
LIU Wei
LIU Wei, WANG Xi, GAN You-Min, HUANG Lin-Kai, XIE Wen-Gang, MIAO Jia-Min. GENETIC DIVERSITY OF KOBRESIA PYGMAEA POPULATIONS ALONG A GRAZING GRADIENT[J]. Chin J Plant Ecol, 2009, 33(5): 966-973.
项目 Item | 放牧压力 Grazing pressure | |||
---|---|---|---|---|
对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG | |
群落优势种与主要伴生种 Community dominant species and main companion species | 1、2、3、4 | 1、2、4、5 | 4、1、3、6 | 5、6、1、4 |
多年生牧草种数 No. of perennial species | 15 | 12 | 8 | 5 |
一、二年生植物种数 No. of annual species | 7 | 11 | 13 | 15 |
植被盖度 Vegetation cover (%) | 96 | 83 | 65 | 51 |
植被高度 Vegetation height (cm) | 28 | 18 | 13 | 6 |
7月干草产量 Dry weight of plant community in July (g·m-2) | 368.3 | 213.8 | 135.7 | 64.9 |
Table 1 Plant community characteristics along different grazing gradients
项目 Item | 放牧压力 Grazing pressure | |||
---|---|---|---|---|
对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG | |
群落优势种与主要伴生种 Community dominant species and main companion species | 1、2、3、4 | 1、2、4、5 | 4、1、3、6 | 5、6、1、4 |
多年生牧草种数 No. of perennial species | 15 | 12 | 8 | 5 |
一、二年生植物种数 No. of annual species | 7 | 11 | 13 | 15 |
植被盖度 Vegetation cover (%) | 96 | 83 | 65 | 51 |
植被高度 Vegetation height (cm) | 28 | 18 | 13 | 6 |
7月干草产量 Dry weight of plant community in July (g·m-2) | 368.3 | 213.8 | 135.7 | 64.9 |
上游引物 Forward primers (5′→3′) | 下游引物 Reverse primers (5′→3′) |
---|---|
me1: TGAGTCCAAACCGGATA me2: TGAGTCCAAACCGGAGC me5: TGAGTCCAAACCGGAAG me6: TGAGTCCAAACCGGTAA me11: TGAGTCCAAACCGGTGT | em1: GACTGCGTACGAATTAAT em2: GACTGCGTACGAATTTGC em3: GACTGCGTACGAATTGAC em4: GACTGCGTACGAATTTGA em5: GACTGCGTACGAATTAAC em7: GACTGCGTACGAATTCAA em8: GACTGCGTACGAATTCTG em12: GACTGCGTACGAATTATG em13: GACTGCGTACGAATTAGC em16: GACTGCGTACGAATTTCG |
Table 2 Primer sequences used in SRAP analyses of Kobresia pygmaea populations
上游引物 Forward primers (5′→3′) | 下游引物 Reverse primers (5′→3′) |
---|---|
me1: TGAGTCCAAACCGGATA me2: TGAGTCCAAACCGGAGC me5: TGAGTCCAAACCGGAAG me6: TGAGTCCAAACCGGTAA me11: TGAGTCCAAACCGGTGT | em1: GACTGCGTACGAATTAAT em2: GACTGCGTACGAATTTGC em3: GACTGCGTACGAATTGAC em4: GACTGCGTACGAATTTGA em5: GACTGCGTACGAATTAAC em7: GACTGCGTACGAATTCAA em8: GACTGCGTACGAATTCTG em12: GACTGCGTACGAATTATG em13: GACTGCGTACGAATTAGC em16: GACTGCGTACGAATTTCG |
引物对 Primer pairs bands | 扩增总条带数 Total No. of polymorphic | 多态性条带数 No. of polymorphic bands | 多态性比率 Percentage of polymorphic bands (%) |
---|---|---|---|
me1-em1 me1-em2 me1-em3 me1-em8 me1-em12 me1-em16 me2-em4 me2-em5 me2-em7 me2-em13 me2-em16 me5-em1 me5-em2 me5-em3 me5-em4 me5-em5 me5-em7 me6-em11 me11-em5 me11-em7 | 34 18 24 17 17 25 19 19 17 19 30 25 23 21 26 21 20 27 22 24 | 27 16 22 13 16 23 12 15 15 17 24 24 19 19 21 18 17 24 19 21 | 79.41 88.89 79.16 76.47 94.12 80.00 63.16 78.95 88.24 89.47 80.00 96.00 82.61 90.48 80.77 85.71 85.00 88.89 86.36 87.50 |
总计 Total | 448 | 376 | |
平均值 Average | 22.4 | 18.8 | 83.93 |
Table 3 Amplification results of Kobresia pygmaea populations from 20 primer combination
引物对 Primer pairs bands | 扩增总条带数 Total No. of polymorphic | 多态性条带数 No. of polymorphic bands | 多态性比率 Percentage of polymorphic bands (%) |
---|---|---|---|
me1-em1 me1-em2 me1-em3 me1-em8 me1-em12 me1-em16 me2-em4 me2-em5 me2-em7 me2-em13 me2-em16 me5-em1 me5-em2 me5-em3 me5-em4 me5-em5 me5-em7 me6-em11 me11-em5 me11-em7 | 34 18 24 17 17 25 19 19 17 19 30 25 23 21 26 21 20 27 22 24 | 27 16 22 13 16 23 12 15 15 17 24 24 19 19 21 18 17 24 19 21 | 79.41 88.89 79.16 76.47 94.12 80.00 63.16 78.95 88.24 89.47 80.00 96.00 82.61 90.48 80.77 85.71 85.00 88.89 86.36 87.50 |
总计 Total | 448 | 376 | |
平均值 Average | 22.4 | 18.8 | 83.93 |
项目 Item | 样本数 Sample size | 多态位点 Polymorphic loci | 多态位点百分比 Percentage of polymorphic loci | Nei’s遗传多样性 指数H* | Shannon信息 指数I* | |
---|---|---|---|---|---|---|
对照 CK | 平均值 Mean | 25 | 358 | 79.91% | 0.266 9a | 0.405 2a |
标准误差 SD | 0.178 5 | 0.244 8 | ||||
轻度放牧 LG | 平均值 Mean | 25 | 340 | 75.89% | 0.246 7ab | 0.372 3ab |
标准误差 SD | 0.190 7 | 0.265 9 | ||||
中度放牧 MG | 平均值 Mean | 25 | 334 | 74.55% | 0.242 4ab | 0.367 0ab |
标准误差 SD | 0.188 6 | 0.264 1 | ||||
重度放牧 HG | 平均值 Mean | 25 | 324 | 72.32% | 0.218 5b | 0.334 7b |
标准误差 SD | 0.187 1 | 0.263 3 | ||||
物种水平 | 0.276 6 | 0.539 0 | ||||
Species level | 0.141 4 | 0.177 6 |
Table 4 Difference of polymorphic loci, Nei’s gene diversity index and Shannon information index of Kobresia pygmaea populations under different grazing intensities
项目 Item | 样本数 Sample size | 多态位点 Polymorphic loci | 多态位点百分比 Percentage of polymorphic loci | Nei’s遗传多样性 指数H* | Shannon信息 指数I* | |
---|---|---|---|---|---|---|
对照 CK | 平均值 Mean | 25 | 358 | 79.91% | 0.266 9a | 0.405 2a |
标准误差 SD | 0.178 5 | 0.244 8 | ||||
轻度放牧 LG | 平均值 Mean | 25 | 340 | 75.89% | 0.246 7ab | 0.372 3ab |
标准误差 SD | 0.190 7 | 0.265 9 | ||||
中度放牧 MG | 平均值 Mean | 25 | 334 | 74.55% | 0.242 4ab | 0.367 0ab |
标准误差 SD | 0.188 6 | 0.264 1 | ||||
重度放牧 HG | 平均值 Mean | 25 | 324 | 72.32% | 0.218 5b | 0.334 7b |
标准误差 SD | 0.187 1 | 0.263 3 | ||||
物种水平 | 0.276 6 | 0.539 0 | ||||
Species level | 0.141 4 | 0.177 6 |
项目 Item | 对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG |
---|---|---|---|---|
对照 CK | ||||
轻度放牧 LG | 0.043 9 | |||
中度放牧 MG | 0.049 4 | 0.134 8 | ||
重度放牧 HG | 0.144 6 | 0.132 3 | 0.116 1 |
Table 5 Genetic differentiation coefficient among Kobresia pygmaea populations under different grazing intensities
项目 Item | 对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG |
---|---|---|---|---|
对照 CK | ||||
轻度放牧 LG | 0.043 9 | |||
中度放牧 MG | 0.049 4 | 0.134 8 | ||
重度放牧 HG | 0.144 6 | 0.132 3 | 0.116 1 |
项目 Item | 对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG |
---|---|---|---|---|
对照 CK | ||||
轻度放牧 LG | 5.436 9 | |||
中度放牧 MG | 3.798 3 | 1.604 8 | ||
重度放牧 HG | 1.477 8 | 1.638 8 | 1.903 8 |
Table 6 Genetic flow (Nm*) among Kobresia pygmaea populations under different grazing intensities
项目 Item | 对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG |
---|---|---|---|---|
对照 CK | ||||
轻度放牧 LG | 5.436 9 | |||
中度放牧 MG | 3.798 3 | 1.604 8 | ||
重度放牧 HG | 1.477 8 | 1.638 8 | 1.903 8 |
项目 Item | 对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG |
---|---|---|---|---|
对照 CK | 0.976 7 | 0.961 9 | 0.948 9 | |
轻度放牧 LG | 0.023 6 | 0.961 8 | 0.948 1 | |
中度放牧 MG | 0.032 9 | 0.031 1 | 0.947 5 | |
重度放牧 HG | 0.051 3 | 0.052 0 | 0.052 7 |
Table 7 Nei’s genetic distance and genetic identity of Kobresia pygmaea populations under different grazing intensities
项目 Item | 对照 CK | 轻度放牧 LG | 中度放牧 MG | 重度放牧 HG |
---|---|---|---|---|
对照 CK | 0.976 7 | 0.961 9 | 0.948 9 | |
轻度放牧 LG | 0.023 6 | 0.961 8 | 0.948 1 | |
中度放牧 MG | 0.032 9 | 0.031 1 | 0.947 5 | |
重度放牧 HG | 0.051 3 | 0.052 0 | 0.052 7 |
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