Chin J Plant Ecol ›› 2007, Vol. 31 ›› Issue (4): 680-688.DOI: 10.17521/cjpe.2007.0088
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LI Jun-Min1,3, DONG Ming2,*(), ZHONG Zhang-Cheng1
Received:
2006-08-20
Accepted:
2007-01-05
Online:
2007-08-20
Published:
2007-07-30
Contact:
DONG Ming
LI Jun-Min, DONG Ming, ZHONG Zhang-Cheng. POPULATION GENETIC DIFFERENTIATIONS IN THE INVASIVE PLANT MIKANIA MICRANTHA IN CHINA[J]. Chin J Plant Ecol, 2007, 31(4): 680-688.
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URL: https://www.plant-ecology.com/EN/10.17521/cjpe.2007.0088
引物 Primers | 序列 Sequences | 引物 Primers | 序列 Sequences |
---|---|---|---|
UBC808 | (AG)8C | UBC873 | (GACA)4 |
UBC811 | (GA)8C | UBC880 | (GGAGA)3 |
UBC841 | (GA)8YC | UBC884 | HBH(AG)7 |
UBC857 | (AC)8YG | UBC885 | BHB(GA)7 |
UBC864 | (ATG)6 | UBC886 | VDV(CT)7 |
UBC868 | (GAA)6 | UBC887 | DVD(TC)7 |
Table 1 Sequences of 12 primers used in ISSR analysis
引物 Primers | 序列 Sequences | 引物 Primers | 序列 Sequences |
---|---|---|---|
UBC808 | (AG)8C | UBC873 | (GACA)4 |
UBC811 | (GA)8C | UBC880 | (GGAGA)3 |
UBC841 | (GA)8YC | UBC884 | HBH(AG)7 |
UBC857 | (AC)8YG | UBC885 | BHB(GA)7 |
UBC864 | (ATG)6 | UBC886 | VDV(CT)7 |
UBC868 | (GAA)6 | UBC887 | DVD(TC)7 |
Fig.1 ISSR amplification of Mikania micrantha in GL population generated with primer UBC 811 1~20: 个体1~20 Individual 1-20 M: λDNA/EcoR I+Hind III分子量参照物 λDNA/EcoR I+Hind III standard molecular weight marker
种群(代码) Population(Code) | 多态位点数 Number of polymorphic loci | 多态位点百分率(%) Percetage of polymorphic loci (P) | Shannon信息指数 Shannon's information index (I) | Nei基因多样性 Nei's genet diversity (h) |
---|---|---|---|---|
西湖乐园 (XH) | 69 | 40.35 | 0.233 5 | 0.159 8 |
民俗村 (MS) | 59 | 34.50 | 0.179 1 | 0.118 9 |
大王山 (DWS) | 62 | 36.26 | 0.191 2 | 0.129 5 |
大望村 (DW) | 58 | 33.92 | 0.190 1 | 0.128 4 |
内伶仃岛I (NLD I) | 55 | 32.16 | 0.155 2 | 0.102 6 |
内伶仃岛II (NLD II) | 57 | 33.33 | 0.165 8 | 0.110 8 |
梧桐山 (WT) | 58 | 33.92 | 0.164 0 | 0.108 2 |
去梧桐山公路边 (GL) | 55 | 32.16 | 0.152 2 | 0.099 7 |
种Speices | 103 | 60.23 | 0.281 8 | 0.184 9 |
Table 2 Estimates of genetic diversity within populations of Mikania micrantha
种群(代码) Population(Code) | 多态位点数 Number of polymorphic loci | 多态位点百分率(%) Percetage of polymorphic loci (P) | Shannon信息指数 Shannon's information index (I) | Nei基因多样性 Nei's genet diversity (h) |
---|---|---|---|---|
西湖乐园 (XH) | 69 | 40.35 | 0.233 5 | 0.159 8 |
民俗村 (MS) | 59 | 34.50 | 0.179 1 | 0.118 9 |
大王山 (DWS) | 62 | 36.26 | 0.191 2 | 0.129 5 |
大望村 (DW) | 58 | 33.92 | 0.190 1 | 0.128 4 |
内伶仃岛I (NLD I) | 55 | 32.16 | 0.155 2 | 0.102 6 |
内伶仃岛II (NLD II) | 57 | 33.33 | 0.165 8 | 0.110 8 |
梧桐山 (WT) | 58 | 33.92 | 0.164 0 | 0.108 2 |
去梧桐山公路边 (GL) | 55 | 32.16 | 0.152 2 | 0.099 7 |
种Speices | 103 | 60.23 | 0.281 8 | 0.184 9 |
变异来源 Source of variance | 自由度 df | 变异组分 Variance component | 百分率 Pcentage | p值 p value* |
---|---|---|---|---|
种群间Among popualtions | 7 | 5.257 7 | 36.49 | <0.001 |
种群内Within populations | 152 | 9.150 7 | 63.51 | <0.001 |
Table 3 Analysis of molecular variance (AMOVA) for the eight populations of Mikania micrantha
变异来源 Source of variance | 自由度 df | 变异组分 Variance component | 百分率 Pcentage | p值 p value* |
---|---|---|---|---|
种群间Among popualtions | 7 | 5.257 7 | 36.49 | <0.001 |
种群内Within populations | 152 | 9.150 7 | 63.51 | <0.001 |
Shannon信息指数Shannon's information index | Nei基因多样性 Nei's gene diversity | ||
---|---|---|---|
种群内遗传多样性 Within population genetic diversity, Hpop(SD) | 0.184 9 (0.037 8) | 种群内基因多样性 Within population gene diversity, HS (SD) | 0.119 7 (0.017 4) |
种群总的遗传多样性 Total genetic diversity, Hsp(SD) | 0.281 8 (0.275 3) | 种群总的基因多样性 Total gene diversity, HT (SD) | 0.184 9 (0.194 3) |
种群内遗传多样性比率 Ratio of genetic diversity within population, Hpop/Hsp | 0.656 1 | 种群内基因多样性比率 Ratio of gene diversity within population, Hs/HT | 0.647 6 |
种群间遗传多样性比率 Ratio of genetic diversity among population, (Hsp-Hpop)/Hsp | 0.343 9 | 遗传分化系数 Gene differentiation among populations, GST | 0.3524 |
基因流 Gene flow, Nm | 0.918 7 |
Table 4 Genetic differentiations within and among the eight populations of Mikania micrantha
Shannon信息指数Shannon's information index | Nei基因多样性 Nei's gene diversity | ||
---|---|---|---|
种群内遗传多样性 Within population genetic diversity, Hpop(SD) | 0.184 9 (0.037 8) | 种群内基因多样性 Within population gene diversity, HS (SD) | 0.119 7 (0.017 4) |
种群总的遗传多样性 Total genetic diversity, Hsp(SD) | 0.281 8 (0.275 3) | 种群总的基因多样性 Total gene diversity, HT (SD) | 0.184 9 (0.194 3) |
种群内遗传多样性比率 Ratio of genetic diversity within population, Hpop/Hsp | 0.656 1 | 种群内基因多样性比率 Ratio of gene diversity within population, Hs/HT | 0.647 6 |
种群间遗传多样性比率 Ratio of genetic diversity among population, (Hsp-Hpop)/Hsp | 0.343 9 | 遗传分化系数 Gene differentiation among populations, GST | 0.3524 |
基因流 Gene flow, Nm | 0.918 7 |
种群Population | XH | MS | DWS | DW | NLD I | NLD II | WT | GL |
---|---|---|---|---|---|---|---|---|
西湖乐园(XH) | - | 0.912 2 | 0.927 9 | 0.916 8 | 0.913 9 | 0.904 6 | 0.928 5 | 0.913 3 |
民俗村(MS) | 0.091 9 | - | 0.900 2 | 0.920 4 | 0.902 5 | 0.894 2 | 0.925 7 | 0.900 3 |
大王山(DWS) | 0.074 8 | 0.105 1 | - | 0.924 7 | 0.906 2 | 0.904 8 | 0.928 5 | 0.895 4 |
大望村(DW) | 0.086 9 | 0.083 0 | 0.078 3 | - | 0.922 8 | 0.911 2 | 0.933 9 | 0.915 3 |
内伶仃岛I (NLD I) | 0.090 1 | 0.102 6 | 0.098 5 | 0.080 4 | - | 0.943 1 | 0.920 9 | 0.893 |
内伶仃岛II (NLD II) | 0.100 3 | 0.111 8 | 0.100 0 | 0.093 0 | 0.058 5 | - | 0.930 9 | 0.893 5 |
梧桐山(WT) | 0.074 2 | 0.077 2 | 0.074 2 | 0.068 4 | 0.082 4 | 0.071 6 | - | 0.950 0 |
去梧桐山公路边(GL) | 0.090 6 | 0.105 0 | 0.110 4 | 0.088 5 | 0.113 2 | 0.112 6 | 0.051 3 | - |
Table 5 Genetic similarity and genetic distances among the eight populations of Mikania micrantha
种群Population | XH | MS | DWS | DW | NLD I | NLD II | WT | GL |
---|---|---|---|---|---|---|---|---|
西湖乐园(XH) | - | 0.912 2 | 0.927 9 | 0.916 8 | 0.913 9 | 0.904 6 | 0.928 5 | 0.913 3 |
民俗村(MS) | 0.091 9 | - | 0.900 2 | 0.920 4 | 0.902 5 | 0.894 2 | 0.925 7 | 0.900 3 |
大王山(DWS) | 0.074 8 | 0.105 1 | - | 0.924 7 | 0.906 2 | 0.904 8 | 0.928 5 | 0.895 4 |
大望村(DW) | 0.086 9 | 0.083 0 | 0.078 3 | - | 0.922 8 | 0.911 2 | 0.933 9 | 0.915 3 |
内伶仃岛I (NLD I) | 0.090 1 | 0.102 6 | 0.098 5 | 0.080 4 | - | 0.943 1 | 0.920 9 | 0.893 |
内伶仃岛II (NLD II) | 0.100 3 | 0.111 8 | 0.100 0 | 0.093 0 | 0.058 5 | - | 0.930 9 | 0.893 5 |
梧桐山(WT) | 0.074 2 | 0.077 2 | 0.074 2 | 0.068 4 | 0.082 4 | 0.071 6 | - | 0.950 0 |
去梧桐山公路边(GL) | 0.090 6 | 0.105 0 | 0.110 4 | 0.088 5 | 0.113 2 | 0.112 6 | 0.051 3 | - |
种群Population | XH | MS | DWS | DW | NLD I | NLD II | WT | GL |
---|---|---|---|---|---|---|---|---|
西湖乐园(XH) | - | |||||||
民俗村(MS) | 50.3 | - | ||||||
大王山(DWS) | 26 | 26.3 | - | |||||
大望村(DW) | 54.7 | 19 | 37.6 | - | ||||
内伶仃岛I (NLD I) | 103.9 | 22.1 | 29.1 | 40.5 | - | |||
内伶仃岛II (NLD II) | 104.2 | 22.5 | 29.6 | 40.7 | 1.6 | - | ||
梧桐山(WT) | 54.2 | 19.5 | 37.2 | 0.6 | 41.1 | 41.3 | - | |
去梧桐山公路边(GL) | 54.4 | 19.2 | 37.4 | 0.3 | 40.9 | 41.1 | 0.3 | - |
Table 6 Geographical distances (km) among the eight populations of Mikania micrantha
种群Population | XH | MS | DWS | DW | NLD I | NLD II | WT | GL |
---|---|---|---|---|---|---|---|---|
西湖乐园(XH) | - | |||||||
民俗村(MS) | 50.3 | - | ||||||
大王山(DWS) | 26 | 26.3 | - | |||||
大望村(DW) | 54.7 | 19 | 37.6 | - | ||||
内伶仃岛I (NLD I) | 103.9 | 22.1 | 29.1 | 40.5 | - | |||
内伶仃岛II (NLD II) | 104.2 | 22.5 | 29.6 | 40.7 | 1.6 | - | ||
梧桐山(WT) | 54.2 | 19.5 | 37.2 | 0.6 | 41.1 | 41.3 | - | |
去梧桐山公路边(GL) | 54.4 | 19.2 | 37.4 | 0.3 | 40.9 | 41.1 | 0.3 | - |
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